Course Structure Diagram with Course Credit

First Year

 

Fall Term

 

Course CodeCourse NameCourse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG101General and Cell Biology3347
CHM104General Chemistry for Biological Sciences and Engineering3245
PHY101General Physics I3145
COM101Computer I0322
ENG101English I3023
AIT 101 /AIT103 (for

international students)

Atatürk’s Principles and History of Turkish Revolution I2022
TUR101/YIT104 (for

international students)

Turkish I2022
CAM100Campuse Orientation2002
GEC35121st Century Skills2002
Total 2092030

Spring Term

 

Course CodeCourse NameCourse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG104Molecular Cell Biology3246
MBG108Genetics3246
MBG107Microbiology3245
CHM122Organic Chemistry3035
AIT 102/AIT104Atatürk’s Principles and History of Turkish Revolution II2022
TUR 102/YIT102Turkish II2022
CAR100Career Planning2002
CHC100Cyprus: History and Culture2002
Total 2061930

 

Second Year Fall Term

 

Course CodeCourse NameCourse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG211Molecular Genetics3247
MBG202Genes and Inheritance3036
MBG209Biophysics3035
MBG204Biochemistry3036
MBG205Biotechnology Techniques3246
Total 1541730

 

Spring Term

 

Course CodeCourse NameCourse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG207Human Genetics and Genomics3246
MBG212Ethics and Regulations3045
MBG203Anatomy and Physiology3035
MBG210Introduction to Pharmacology3035
MTH218Fundamentals of Mathematics3036
ENG202Academic English and Writing3033
Total 1822030

 

Third Year Fall Term

 

Course CodeCourse NameCourse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG301Medical Genetics4046
MBG302Gene Regulation and Epigenetics3036
MBG303Population Genetics and Genetic Epidemiology3036
MBG304Bioinformatics3247
MBG311Biostatistics3035
Total 1621730

 

Spring Term

Course CodeCourse NameCourse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG305Laboratory Safety and Techniques3245
MBG306Current Developments in Molecular Biology3035
MBG307Protein Structure and Function4045
MBG312Embryology and Reproduction 3035
MBG310Immunology for Molecular Biologists4045
 Elective3035
Total 2022130

 

Fourth Year Fall Term

Course CodeCourse Nameurse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG402Cancer Genetics3045
MBG407Genetic Counselling3035
MBG513 

Ecology

3045
 Elective3035
                        Elective3035
 Elective3035
Total 1802030

 

Spring Term

 

Course CodeCourse NameCourse Hour/WeekLab/Study/ Hour/WeekCreditECTS
MBG401Graduation Project I01867
MBG406Compulsory Internship01868
MBG519Evolution3045
 Elective3035
 Elective3035
Total 9362230

 

 

 

 

 

 

Elective courses:

 

MBG503 Aging

MBG508 Nanotechnology and Modelling in Biological Systems

MBG512 Microbiome

MBG515 Modern Biotechnology

MBG520 R-coding

MBG521 Stem Cell Biology

MBG522 DNA Damage and Repair Mechanisms

MBG523 Medical Virology

MBG524 Critical Scientific Reading

MBG526 Sustainable Development

 

First Year Courses

MBG101 General and Cell Biology

Course Description: The aim of this course is to present the basic concepts of living organisms, and biological structures. This course will also provide understanding to the cell biology including organelles, cell communication and cytoskeleton. It will also provide brief introduction to nucleic acids.

Textbooks and/or References:

1)TheMolecularBiologyoftheCell,Albertsetal.2008.

2) Medical Cell Biology, Steven R Goodman, 2008.

Assessment: Midterm exam and Final exam

 

 

CHM104 General Chemistry for Biological Sciences and Engineering

Course Description: This course is designed as a one-semester course for freshman molecular biology and genetics, food, biomedical and bioengineering students.

Textbooks and/or References:

1) Chemistry Principles and Reactions (7th edition, 2012) by William L. Masterton and Cecile N. Hurley, Brooks/Cole Cengage Learning

2) CHM104 Lab Manual

Assessment: Midterm exam, Lab, Final exam and Attendance

 

 

PHY101 General Physics

Course Description: This course will give information about electric field and potential, capacity, current and resistance, magnetism, inductance, Maxwell's equations, electromagnetic waves.

Textbooks and/or References:

1) J. Walker, D. Halliday, R. Resnick, “Principles of Physics”, 10th Edition, Wiley

2) Douglas C. Giancoli, Physics for Scientist and Engineers with Modern Physics, 4th Edition, Printice Hall

3) R. A. Serway and R. J. Beichner , “Physics for Scientist and Engineers with Modern Physics”, 8th

Assessment: Midterm exam, Lab, Final exam

 

COM101 Computer I

Course Description: This course covers the ability of students to use basic information technologies effectively in their courses and professions.

Textbooks and/or References: Lecture notes given by the instructors

Assessment: Quiz, Homework, Midterm exam, Final exam, Attendance

 

 

 

 

ENG101 English I

Course Description: ENG 101 aims to develop students’ awareness of the language used in everyday life situations as well as the vocabulary items used in different topics. The course has been designed to show the students communicatively useful expressions in their immediate environment. Understanding how the language is used to maintain communication or convey meaning in specific situations is prior to how the structures are put together to form the language. The aim is to expose students to some basic functions in some specific situations and topics at A2/B1 level of the CEFR so that the students can easily communicate with the foreign people in their immediate environment and develop their ability to comprehend oral English.

Textbooks and/or References: Videos and materials designed and prepared by Faculty English Programmes Unit

Assessment: Midterm exam and Final exam

 

 

AIT101/AIT103 Atatürk’s Principles and History of Turkish Revolution I

Course Description: This course will give information about the definition of the revolution, and the Turkish Revolution, the collapse of the Ottoman Empire, the National Struggle Period, the wars, congresses, relations with the states, and agreements made during the National Struggle Period.

Textbooks and/or References:

1) Ali Efdal Özkul-Hasan Samani, İmparatorluk’tan Cumhuriyet’e Modern Türkiye’nin Oluşumu Atatürk İlkeleri ve İnkılâp Tarihi,Ankara 2010.

2) Prof. Dr. Afet İnan, A History of The Turkish Revolution And Turkish Republic, çev. A.E. Uysal, Ankara 1981.

3) Mustafa Kemal Atatürk, Nutuk, I, II, III, Ankara 1998.

4) Ergün Aybars, Türkiye Cumhuriyeti Tarihi, Ankara 1994

5) Kazım Özalp, Milli Mücadele, I,II, Ankara 1998

6) Yusuf Hikmet Bayur, Türk İstiklâl Harbi, I,II, Ankara

7) Bernard Lewis, Modern Türkiye’nin Doğuşu, Ankara 1970.

Assessment: Midterm exam and Final exam

 

 

TUR101/YIT101 Turkish I

Course Description: Definition and importance of language; language-culture relation; written language and its features, external structure and rules in written expression, spelling rules and punctuation; plan, theme, point of view, and supporting ideas in the writing, paragraph writing; composition concept, composition writing rules and plans; composition roof, theme, and paragraph analysis in the selected writings, composition correction studies, general expression irregularity, thinking and expressing one's thoughts; various writing types (anecdote, stories, criticisms, novels, etc.) formal writings (curriculum vitae, petition, report, announcement, bibliography, official articles, scientific articles, articles, etc.) and introduction, development and conclusion sections of the articles will be taught.

Textbooks and/or References: To be announced

Assessment: Midterm exam and Final exam

 

CAM100 Campus Orientation

Course Description: Organized so that our students can get to know university life better, this course consists of various activities aimed at gaining the identity of being a Near Easterner and adapting to university life more easily.

Textbooks and/or References: Video prepared about each module and links and materials shared on the UZEBIM course page.

Assessment: Module* Questions/Tasks

 

GEC351 21st Century Skills

Course Description: The 21st Century Skills course aims to develop students' fundamental thinking skills, such as critical, creative, and philosophical thinking, problem-solving, lifelong learning, and effective learning strategies. In addition, it fosters social skills such as effective communication, teamwork, intercultural interaction, and diversity management. Digital literacy, media awareness, information management, and basic statistical knowledge support students in becoming effective and conscious individuals in the digital environment. Self-management skills such as self-awareness, emotional intelligence, resilience, and time management encourage individual development, while sustainability, ethical leadership, and global citizenship foster a sense of social responsibility. Finally, applied life skills such as entrepreneurship, financial literacy, stress management, and creative presentation skills are acquired, aiming to equip students with competencies they can use in real life.

Textbooks and/or References: Video prepared about each module and links and materials shared on the UZEBIM course page.

Assessment: Module* Questions/Tasks

 

 

MBG104 Molecular Cell Biology

Course Description: This course will provide an understanding of the structure and the function of nucleic acids. It will also cover gene expression, cell divisions and recombination. It will provide an introduction to germ cell development and fertilisation.

Textbooks and/or References: 1) Molecular Biology of the Cell, 5E, Bruce Alberts, Alexander Johnson, Julian Lewis and Martin Raff, 2008. 2) Molecular Cell Biology: International Edition, Harvey Lodish, Arnold Berk, Chris A. Kaiser, Monty Krieger, Anthony Bretscher, Hidde Ploegh, Angelika Amon and Matthew P. Scott, 2012.

Assessment: Midterm exam and Final exam

 

MBG108 Genetics

Course Description: This course aims to provide an understanding of mutations and polymorphisms, Mendelian genetics, non-Mendelian genetics, biochemical and molecular basis of genetic diseases, cancer genetics, population genetics and evolution.

Textbooks and/or References:

  • Essentials of Genetics, 2013, W. S. Klug, M. R. Cummings, C. A. Spencer and M. A. Palladino, 8th Edition, Pearson
  • Thompson & Thompson Genetics in Medicine. 8th Edition.

Assessment: Midterm exam and Final exam

 

MBG107 Microbiology

Course Description: This course will focus on the study of some major groups of bacteria and parasites of importance in human infection and on the understanding of the key concepts used in investigating and diagnosing infections in the laboratory.

Textbooks and/or References:

1) Medical Microbiology, F.H. Kayner, K. A. Bienz, J. Eckert, R. M. Zinkernagel, 2005

2) Medical Microbiology, William Irwing, Tim Boswell, Dlawer Ala’Aldeen, 2005.

Assessment: Midterm exam and Final exam

 

 

 

CHM122 Organic Chemistry

Course Description: This course will provide an understanding of the fundamental principles of organic chemistry, including nomenclature, structure, bonding, and the basic principles of stereochemistry. Important reactions related to the common functional groups will be covered with emphasis on reaction mechanisms.

Textbooks and/or References:

1) Organic Chemistry, Jonathan Clayden, Nick Greeves, Stuart Warren, 2012.

2) Organic Chemistry, William Brown, Christopher Foote, Brent Iverson, Eric Ansly, 2012.

 

Assessment: Quiz, Homework, Group project, Midterm exam, Final exam, Attendance

 

 

AIT102/AIT104 Atatürk’s Principles and History of Turkish Revolution II

Course Description: This course will give information about the relations and agreements with foreign states from the Treaty of Lausanne, the reforms made in legal, political, social, educational and cultural fields, the Turkish foreign policy of the Mustafa Kemal era, and transfer of Atatürk's principles and integral principles and Ataturkist thought to younger generations.

Textbooks and/or References:

1) Ali Efdal Özkul-Hasan Samani, İmparatorluk’tan Cumhuriyet’e Modern Türkiye’nin Oluşumu Atatürk İlkeleri ve İnkılâp Tarihi,Ankara 2010.

2) Prof. Dr. Afet İnan, A History of The Turkish Revolution And Turkish Republic, çev.

A.E. Uysal, Ankara 1981.

Assessment: Midterm exam and Final Exam

 

TUR102/YIT102 Turkish II

Course Description: This course aims to teach the Turkish language according to the rules.

Textbooks and/or References: To be announced

Assessment: Midterm exam and Final exam

 

CAR100 Career Planning

Course Description: To introduce students to career methods that will help them adapt to the rapidly changing economic, social, cultural, ethical and legal conditions of the business world and to gain the ability to adapt them to their own lives.

Textbooks and/or References:

1) Öz,Steinberg, S. (2006). Introduction to Communication. Mega Digital Publishing.

2) Lynn, H., West, R. (2019). An Introduction to Communication. Cambridge University Press.

3) Öztemel, K. (2019). Career Planning and Development. Ankara: Pegem Publishing House

4) Atay, S., Çırakoğlu Tanıverdi, B., Gülmez, N., (2019). University Career Centers Handbook. Ankara TC Presidency, Human Resources Office, Salmat Basım Pub. Ankara.

Assessment: -

CHC100 Cyprus: History and Culture

Course Description: Being able to comparatively analyse the variable dynamics of Cyprus across the ages also brings with it an understanding of the dynamics of the Mediterranean basin. Having information about the island of Cyprus and the Mediterranean culture provides us with an opportunity to understand and describe the states established in the Mediterranean, the religious communities operating there, and the socio-cultural interactions between people. This course offers the opportunity to examine in depth the social, economic and cultural dynamics of Cyprus, which acts as a bridge between East and West.

Textbooks and/or References:

1) Cyprus in Ancient Times Alasya F. / Ankara Turkish Culture Research Institute, Published in 1977,

2) Video prepared for each module and links and materials shared on the UZEBIM course page.

Assessment: Midterm exam and Final Exam

 

Second Year Courses

MBG211 Molecular Genetics

Course Description: This course introduces the fundamental principles of molecular genetics, focusing on the structure, function, and regulation of genetic material at the molecular level. Topics include DNA replication, transcription, translation, gene regulation in prokaryotic and eukaryotic systems, mutations and DNA repair mechanisms, and genome organization. The course also covers modern molecular genetic techniques such as PCR, gel electrophoresis, cloning, sequencing, and basic genomic and transcriptomic approaches. Emphasis is placed on understanding the molecular basis of heredity, gene expression, and genetic variation, as well as the application of molecular genetics in medicine, biotechnology, and research.

Textbooks and/or References:

  • Watson et al., Molecular Biology of the Gene
  • Russell, iGenetics: A Molecular Approach
  • Strachan & Read, Human Molecular Genetics

 

Assessment: Midterm exam, Final exam, Coursework

 

MBG202 Genes and Inheritance

Course Description: This course will provide an understanding of basic genetic processes. Inheritance patterns of single-gene traits, pedigree construction, chromosome aberrations, and the multifactorial basis underlying many common traits will be explored.

Textbooks and/or References:

1) Lewin’s Genes XI, Jocelyn E. Krebs, Elliot S. Goldstein, Stephen T. Kilpatrick, 2013.

2) Genome, Matt Ridley, 2000.

Assessment: Midterm exam and Final exam

 

 

MBG209 Biophysics

Course Description: This course explores the principles of structure formation of biomacromolecules, presenting physical methods for the measurement of molecular forces and molecular structure. It will also deliver insight into membrane physics and transport phenomena.

Textbooksand/orReferences:

1) An Introduction Biophysics, 2E, Roland Graser, 2012.

2) Biophysics, William Bialeck, 2012.

Assessment: Midterm exam and Final exam

 

MBG204 Biochemistry

Course     Description:     In     this      course,                 students           will   learn   about nucleic acids,proteins,lipids,carbohydrates and reactions involved.

Textbooks and/or References:

1) Lehninger Principle of Biochemistry, 6E, David L. Nelson and Michael M. Cox, 2013

2) Clinical Biochemistry, Nessar Ahmed, 2010

3) Biochemistry, 7E, Jeremy M. Berg, John L. Tymoczko and Lubert Stryer, 2011 Assessment: Midterm exam and Final exam

 

MBG205 Biotechnology Techniques

Course Description: In this course students will learn about methods used in biotechnology to investigate the nucleic acids and proteins.

Textbooks and/or References:

1) Molecular Biology Techniques, Susan Carson, Heather Miller, D. Scott Witherow, 2007.

2) Techniques for Molecular Biology, D. Tagu and C. Moussard, 2006.

3) Principles and Techniques Biochemistry and Molecular Biology, 6E, Keith Wilson and John Walker, 2005.

Assessment: Midterm exam and Final exam

 

 

MBG207 Human Genetics and Genomics

Course Description: This course will focus human genetic variation, genomic technology and the structure and function of the human genome. This course will also involve different types of DNA damage, the cellular defence mechanisms that preserve genetic integrity and the major repair mechanisms used by human cells to correct different types.

Textbooks and/or References:

1) Lewin’s Genes XI, Jocelyn E. Krebs, Elliot S. Goldstein, Stephen T. Kilpatrick, 2013.

2) Genome, Matt Ridley, 2000.

Assessment: Midterm exam and Final exam

 

 

MBG212 Ethics

Course Description: This course examines ethical issues arising from advances in biology and genetics. Students explore moral principles, ethical theories, and regulatory frameworks relevant to biological research, genetic testing, genomic medicine, and biotechnology. Emphasis is placed on ethical decision-making, responsible conduct of research, patient rights, and societal implications of genetic technologies.

Textbooks and/or References:

  • Beauchamp & Childress, Principles of Biomedical Ethics
  • Nuffield Council on Bioethics reports
  • UNESCO Bioethics Declarations
  • NSGC and WHO ethics guidelines

 

Assessment: Discusions, journal club, case study, participation

 

MBG203 Anatomy and Physiology

Course Description: This course will consider the principal functions of the human gastro-intestinal tract and the renal system, explaining how these systems are affected by diseases.

Textbooks and/or References:

1) Principles of Anatomy and Physiology International Student Version, Gerard J. Tortora and bryan H. Derrickson, 2011.

2) Medical Physiology, 11E, Guyton and Hall, 2005

3) Gray’s Anatomy, Richard Drake, A. Wayne Vogl and Adam W.M. Mitchell, 2009

Assessment: Midterm exam and Final exam

 

MBG210 Introduction to Pharmacology

Course Description: This course will provide a firm foundation in the principles underlying pharmacology and toxicology, including the nature of drug targets, their interaction and response, the fate of drugs within the body, toxicity classification and testing, poisons and antidotes, adverse drug reactions, selective toxicity, drug discovery and development.

Textbooks and/or References:

1) Introduction to Pharmacology, Mary Kane Asperheim, Justin P. Favaro, 2011.

2) Roach's Introductory Clinical Pharmacology, Susan M. Ford, Sally S. Roach.

Assessment: Midterm exam and Final exam

 

MTH218 Fundamentals of Mathematics

Course Description: In this course, students will be taught functions, limits, derivatives and integrals.

Textbooks and/or References: Robert A. Adams, Christopher Essex, Calculus, 7th edition

Assessment: Midterm exam and Final exam

 

 

ENG202 Academic English and Writing

Course Description: The course starts with summarizing in order to to give the students the idea that every piece of writing has a main idea and main points. It then develops into paragraph writing(descriptive & opinion), argumentative essay, report writing, process writing, CV writing and job application letter. The course also aims to develop students’ critical thinking and organisation skills while teaching different pieces of writing.

Textbooks and/or References: Materials designed by Faculty English Programme Unit

Assessment: Attendance, Writing activities, Midterm exam, Final exam

 

Third Year Courses

MBG301 Medical Genetics

Course Description: This course will provide the basic principles in medical genetics and the relation between the current knowledge of genetics and clinical applications. This course will further focus on the clinical relevance of the genome structure, mutations, screening, Mendelian and polygenic inheritance and risk assessments of inherited disorders.

Textbooks and/or References:

1) Essential Medical Genetics, Edward Tobias, Michael Connor, Malcolm Ferguson-Smith, 2011.

2) Medical Genetics, G. Bradley Schaefer, James N. Thompson Jr., 2014.

Assessment: Midterm exam and Final exam

 

 

MBG302 Gene Regulation and Epigenetics

Course Description: Students will learn the regulation of gene expression in prokaryotes and eukaryotes, epigenetic modifications and also they also will learn the basics of cancer epigenetics and epigenetic based diseases.

Textbooks and/or References:

1) Molecular Biology of the cell, 5th edition, Bruce Alberts, Alexande Jrohnson,Julian Lewis,Martin Raff,Keith Roberts,Peter Walter,2008.

2) Concepts of Genetics 10 th edition, William S. Klug,Michael R. Cummings,Charlotte

  1. Spencer,Michael A. Palladino, 2012

3) Handbook of EpigeneticsThe New Molecular andMedical GeneticsEdited by Trygve Tollefsbol,2011 Analysis & Principles,Robert J. Brooker, 5/e, 2015

4) Epigenetics: A Reference Manual, Jeffrey Craig, Nicholas C. Wong, 2011

5) Gene Regulation,David Latchman, 5E, 2005

6) Lewin’s Genes XI, Jocelyn E. Krebs, Elliot S. Goldstein, Stephen T. Kilpatrick, 2013

Assessment: Midterm exam and Final exam

 

MBG303 Population Genetics and Genetic Epidemiology

Course Description: In this course, students will be taught the factors playing a role in the distribution of genetic variation in populations, the Hardy-Weinberg principle, recombination, natural selection, and the effects of diversity and genetic factors on family and society.

Textbooks and/or References:

1) Population Genetics, Matthew Hamilton, 2011.

2) An Introduction to Genetic Epidemiology, Lyle J. Palmer, George Davey Smith, Paul R. Burton, 2011.

Assessment: Midterm exam and Final exam

 

MBG304 Bioinformatics

Course Description: The course aims to introduce the fundamentals of computational biology and provide skills in computer methods to draw meaningful biological conclusions from sequence data. Students will gain theoretical and practical experience with standard bioinformatics tools and will be able to understand and use more advanced tools when needed. It is also organized by taking into consideration that each of the students should understand the basics of bioinformatics and have the background knowledge to perform bioinformatics analyzes on their own. At the end of the semester, students are expected to do basic bioinformatics analysis.

Textbooks     and/or     References:

1) M. Zvelebil and J.O. Baum Understanding Bioinformatics Garland Science, 2008.

2) A.M.Lesk Introduction to Bioinformatics Oxford University Press 2002 C.A.Orengo D.T.Jones and J.M.Thornton Bioinformatics

Assessment: Midterm exam and Final exam

 

MBG311 Biostatistics

Course Description: This course will focus on the application of statistical theory to real- world issues, the practice of designing and conducting biomedical experiments and clinical trials, and the study of related computational algorithms and display of data.

Textbooks and/or References:

1) Bioistatistics, Norman & Streiner, third edition, 2008

2) Medical statistics, Betty Kirkwood and Jonathan Sterne, 2003.

Assessment: Midterm exam and Final exam

 

MBG305 Laboratory Safety and Techniques

Course Description: This course aims to deliver information about laboratory safety, regulations and biosafety as well as discussing pros and cons of different laboratory techniques and recent advancements in molecular biology and genetics.

Textbooks and/or References: Current literature

Assessment: Discussion, Attendance

 

MBG306 Current Developments in Molecular Biology

Course Description: In this course recent advancement in Molecular Biology will be presented and discussed by student presentations.

Textbooks and/or References: Current literature

Assessment: Presentation and Homework

 

MBG307 Protein Structure and Function

Course Description: This course will provide an understanding of the structural organization of proteins and its relevance to protein function and an awareness of the biophysical methods available to study protein structure.

Textbooks and/or References:

1) Fundamentals of Protein Structure and Function, Engelbert Buxbaum, 2007.

2) From Protein Structure to Function with Bioinformatics, Daniel John Rigden, 2012.

Assessment: Midterm exam and Final exam

MBG312 Embryology and Reproduction

Course Description: This course will consider the development of a fetus from gametogenesis till birth, as well as covering the abnormalities that might occur during this period. Additionally, prenatal diagnoses and techniques related to assisted reprodıctive technologies will be covered within this course.

Textbooks and/or References:

  • Sadler, T. W. (2018). Langman's medical embryology. Lippincott Williams & Wilkins.
  • Carlson, B. M. (2018). Human embryology and developmental biology. Elsevier Health Sciences.

Assessment: Midterm exam and Final exam

 

MBG310 Immunology for Molecular Biologists

Course Description: In this course, it is aimed to introduce the elements, mechanisms and basic concepts of the immune system.

Textbooks and/or References:

1) David Male Jonathan Brostoff David Roth Ivan Roitt, Immunology.

2) M. Murphy (Author), Casey Weaver (Author), Janeway's Immunobiology

Assessment: Midterm exam and Final exam

 

 

Fourth Year Lectures

MBG402 Cancer Genetics

Course Description: This course will consider the genetic mechanisms underlying specific cancer types, discussing how recent genomic studies have led to the identification of genes that play important roles in cancer formation, and outlining how molecular genetics techniques are facilitating rapid advances in this field.

Textbooks and/or References:

1) Cancer Genetics, BorisPasche,2010.

2) Mitochondrial Genetics and Cancer, Gabriel D. Dakubo, 2010.

Assessment: Midterm exam and Final exam

 

 

MBG407 Genetic counseling

Course Description: This course introduces the principles and practice of genetic counselling, integrating human genetics with psychosocial counseling skills. Students will learn how genetic information is communicated to individuals and families, including risk assessment, interpretation of genetic test results, ethical and legal considerations, and psychosocial support. Emphasis is placed on informed decision-making, patient-centered communication, and the application of genetic counselling in clinical and public health settings.

Textbooks and/or References:

  • Baker et al., A Guide to Genetic Counseling
  • Thompson & Thompson, Genetics in Medicine
  • Nussbaum et al., Medical Genetics
  • National Society of Genetic Counselors (NSGC) resources

 

Assessment: Case Study, Presentation, Participation

 

 

 

MBG513 Ecology

Course Description: The course aims to provide information about basic ecological concepts. The main focus is to understand the lifeworld, its interactions, and its role in the ecosystem.

Textbooks and/or References: Fundamentals of ecology, Eugene P Odum; Gary W Barrett

Assessment: Presentation and Final exam

 

 

 

 

 

 

 

MBG401 Graduation Project I

Course Description: Establishing skills during a relatively independent research is aimed.

Textbooks and/or References: Current literature

Assessment: Graduation project

 

MBG406 Compulsory Internship

Course Description: 45 days of compulsory internship conducted in laboratories working mainly on Medical Genetics and Molecular Biology.

Textbooks and/or References: -

Assessment: Internship booklet is assessed.

 

 

MBG519 Evolution

Course Description: This course is to understand of how evolution works.

Textbooksand/orReferences:

  • Freeman, S., & Herron, J. C. (2007). Evolutionary analysis. Upper Saddle River, NJ: Pearson Prentice Hall.
  • Futuyma, D. J. (2013). Evolution. Third edition. Sunderland, Massachusetts U.S.A: Sinauer Associates, Inc. Publishers.

Assessment: Midterm exam and Final exam

 

Elective courses:

MBG503 Aging

Course Description: This course will focus on the molecular basis of aging.

Textbooks and/or References: Current literature

Assessment: Midterm exam and Final exam

 

 

MBG508 Nanotechnology and Modelling in Biological Systems

Course Description: The aim of this course is to understand the principles of nanotechnology and their use in the fields of biology-medicine-genetics, and learn how to create a scientific nano-project.

Textbooks and/or References:

1) Soloviev, Mikhail (ed.). Nanoparticles in Biology and Medicine. Totawa, NJ: Humana Press, 2012.

2) Binns, Chris. Introduction to Nanoscience and Nanotechnology : Tiny Structure, Big Ideas and Grey Goo. Hoboken, NJ: Wiley, 2010.

3) Ngo, Christian and Voorde, M. H. van de. Nanotechnology in a nutshell. Paris, France: Atlantis Press, 2014.

Assessment: Projects

 

 

MBG512 Microbiome:

Course Description: This course explores the composition, function, and dynamics of microbial communities (microbiomes) in humans, animals, plants, and the environment. Students will study microbiome structure, host–microbe interactions, ecological principles, and modern techniques used to analyze microbial communities, including sequencing-based and bioinformatics approaches. Applications in health, disease, agriculture, and environmental sciences are emphasized.

Textbooks and/or References:

1) Gut Microbiota, Edward Ishiguro Natasha Haskey Kristina Campbell, 2018

2) Fundamentals of Microbiome Science: How Microbes Shape Animal Biology, Angela E. Douglas, 2018

Assessment: Presentation, Assessment, Midterm exam and Final exam

 

 

 

MBG520 R-coding

Course Description: In this course, it is aimed to handle the use of the open-source code program, which will be used for data analysis and display in biological sciences accompanied by applications.

Textbooks and/or References:

1) https://www.r-project.org/,

2) http://www.r-tutor.com/r- introduction

Assessment: Midterm exam and Final exam

 

 

MBG521 Stem Cell Biology

Course Description: In this course, stem cell concepts, stem cell types, application areas of stem cells in research and treatment will be explained.

Textbooksand/orReferences:

  • Robert Lanza, Anthony Atala (2012) Handbook of Stem Cells. Academic Press. ISBN: 978-0-12-385942-6

Assessment: Midterm exam and Final exam

 

 

MBG522 DNA Damage and Repair Mechanisms

Course Description: In this course, students will learn the concepts of DNA damage and mutagenesis and DNA repair mechanisms.

Textbooks and/or References:

1) DNA Repair and Mutagenesis Errol C. Friedberg . . . [et al.].—2nd ed. p. cm.

2) DNA Replication, Recombination, and Repair Molecular Mechanisms and Pathology, DOI 10. 1007/978-4-431-55873-6, Fumio Hanaoka • Kaoru Sugasawa

Assessment: Midterm exam and Final exam

Course Descriptions

MOBG101 General and Cell Biology
Course Description:
The aim of this course is to present the basic concepts of living organisms, and biological structures. This course will also provide understanding to the cell biology including organelles, cell communication and cytoskeleton. It will also provide brief introduction to nucleic acids.
Examinations: Midterm and final

CHEM104 Chemistry for Biological Sciences
Course Description:
This course will provide an understanding of chemical concepts and principles, covering atomic structure and periodic table, chemical bonds and molecular configurations, states of matter, chemical thermodynamics, solutions, oxidation‒reduction reactions and transformation of chemical energy, electrochemistry.
Examinations: Midterm and final

PHY101 Introduction to Physics
Course Description:
This course will provide a solid grounding in physical concepts and principles, covering kinematics and dynamics, fluids, elasticity, wave motion, sound, ideal gases, heat and thermodynamics.
Examinations: Midterm and final

MOBG102 IT and Numeracy Skills for Molecular Biologist
Course Description:
This course will focus on enabling students to develop essential skills in IT literacy including use of different programs for molecular biologists and develop students to assess numeracy skills and ability to evaluate experiment data.
Examinations: Midterm and final

MOBG103 Academic English and Writing Skills
Course Description:
This course will focus on the mastery of specific medical vocabulary and idioms, and improvement in the ability to communicate in English in a hospital or clinical setting.
Examinations: Midterm and final

AIT 101 Atatürk İlkeleri ve İnkilap Tarihi
Course Description:
This course will focus on the political, economical and cultural problems that were being faced during the break down of Ottoman Empire. Establishment of the Turkish Republic by Mustafa Kemal Atatürk will also be covered in this course.
Examinations: TBA

TUR 101 Türkçe I
Course Description:
This course will focus on the Turkish language and composition.
Examinations: TBA

Molecular Cell Biology
Course Description:
This course will provide an understanding of the structure and the function of nucleic acids. It will also cover gene expression, cell divisions and recombination. It will provide an introduction to germ cell development and fertilisation.
Examinations: Midterm and final

MOBG105 Basic Principles of Genetics
Course Description:
This course will provide an understanding of mutations and polymorphisms, Mendelian genetics, non-Mendelian genetics, biochemical and immunogenetics, cancer genetics and population genetics.
Examinations: Midterm and final

MOBG106 Organic Chemistry
Course Description:
This course will provide an understanding of the fundamental principles of organic chemistry, including nomenclature, structure, bonding, and the basic principles of stereochemistry. Important reactions related to the common functional groups will be covered with emphasis on reaction mechanisms.
Examinations: Midterm and final

MOBG107 Biostatistics
Course Description:
This course will focus on the application of statistical theory to real-world issues, the practice of designing and conducting biomedical experiments and clinical trials, and the study of related computational algorithms and display of data.
Examinations: Midterm and final

MOBG201 Chromosome Dynamics
Course Description:
This course will consider the fundamental aspects of chromosome structure and function, with emphasis on genome organisation, inherited disorders, and chromosome aberrations.
Examinations: Midterm and final

MOBG202 Genes and Inheritance
Course Description:
This course will provide an understanding of basic genetic processes. Inheritance patterns of single-gene traits, pedigree construction, chromosome aberrations, and the multifactorial basis underlying many common traits will be explored.
Examinations: Midterm and final

MOBG203 Anatomy and Physiology
Course Description:
This course will consider the principal functions of the human gastro-intestinal tract and the renal system, explaining how these systems are affected by diseases.
Examinations: Midterm and final

MOBG204 Microbiology
Course Description:
This course will focus on the study of some major groups of bacteria and parasites of importance in human infection and on the understanding of the key concepts used in investigating and diagnosing infections in the laboratory.
Examinations: Midterm and final

MOBG205 Biochemistry
Course Description:
This course will provide an understanding of the structure and function of nucleic acids, proteins, lipids, and carbohydrates, the relationships between them, and their synthesis and breakdown. Further topics will include the processes by which the central biochemical pathways make energy, and build new cells from raw materials. Basic concepts in metabolism and metabolic regulation will be introduced to show the role of biochemistry in human health and disease.
Examinations: Midterm and final

MOBG206 Biotechnology Techniques
Course Description:
This course will provide an overview of the theory, principles and practical applications of a number of techniques used in the study of biomolecules, especially nucleic acids and proteins.
Examinations: Midterm and final

MOBG207 Human Genetics and Genomics
Course Description:
This course will focus human genetic variation, genomic technology and the structure and function of the human genome. This course will also involve different types of DNA damage, the cellular defence mechanisms that preserve genetic integrity and the major repair mechanisms used by human cells to correct different types.
Examinations: Midterm and final

MOBG208 Embryology, Developmental Genetics and Teratology
Course Description:
This course will consider the fundamental genetics of developmental events and concepts, covering techniques and concepts in embryology, pattern formation in organisms, genetics of gamete formation, sex determination and dosage compensation, and teratology.
Examinations: Midterm and final

MOBG209 Biophysics
Course Description:
This course explores the principles of structure formation of biomacromolecules, presenting physical methods for the measurement of molecular forces and molecular structure. It will also deliver insight into membrane physics and transport phenomena.
Books: 1) An Introduction Biophysics, 2E, Roland Graser, 2012 2) Biophysics, William Bialeck, 2012
Examinations: Midterm and final

MOBG210 Introduction to Pharmacology
Course Description:
This course will provide a firm foundation in the principles underlying pharmacology and toxicology, including the nature of drug targets, their interaction and response, the fate of drugs within the body, toxicity classification and testing, poisons and antidotes, adverse drug reactions, selective toxicity, drug discovery and development.
Examinations: Midterm and final

MOBG301 Medical Genetics
Course Description:
This course will provide the basic principles in medical genetics and the relation between the current knowledge of genetics and clinical applications. This course will further focus on the clinical relevance of the genome structure, mutations, screening, Mendelian and polygenic inheritance and risk assessments of inherited disorders.
Examinations: Midterm and final

MOBG302 Gene Regulation and Epigenetics
Course Description:
This course will provide an overview of gene expression and regulation in eukaryotes, covering different RNA polymerases, mechanisms of RNA processing, general and specific transcription factors which interact to regulate gene expression. It will also give a general overview on basic mechanisms of epigenetics and it relevance for human biology.
Examinations: Midterm and final

MOBG303 Population Genetics and Genetic Epidemiology
Course Description:
This course will provide an understanding of the processes affecting the distribution of genetic variation in populations of organisms, through space and time. The Hardy-Weinberg principle, gene flow, genetic drift, recombination and linkage disequilibrium, natural selection, the effect of mating systems on diversity, and the neutral theory of evolution will also be covered. How genetic factors contribute to health and disease in families and populations, and how genes interplay with environmental factors will also be covered in this course.

MOBG304 Bioinformatics
Course Description:
This course will focus on the use of online public databases and software to extract, analyse and interpret nucleic acid and protein sequences and to model the structures of RNA and protein sequences.
Examinations: Midterm and final

MOBG305 Neurogenetics and Endocrine Genetics
Course Description:
This course will focus on the genetic analysis of neurological and endocrinological conditions and what we can learn about their causes by investigation of the genes identified.
Examinations: Midterm and final

MOBG306 Evolutionary Genetics
Course Description:
This course will outline the process of evolution, by looking at studies on genetic variation in populations together with theoretical examination of how genes behave in populations. The role of natural selection in evolution will be probed using empirical evidence and theoretical examinations of evolution in action.
Examinations: Midterm and final

MOBG307 Protein Structure and Function
Course Description:
This course will provide an understanding of the structural organisation of proteins and its relevance to protein function and an awareness of the biophysical methods available to study protein structure.
Examinations: Midterm and final

MOBG308 Reproductive and Regenerative Medicine
Course Description:
This course will explore recent discoveries about how reproduction is controlled, how it is affected by diseases and how reproductive processes can be manipulated by medical and pharmacological intervention.
Examinations: Midterm and final

MOBG402 Cancer Genetics
Course Description:
This course will consider the genetic mechanisms underlying specific cancer types, discussing how recent genomic studies have led to the identification of genes that play important roles in cancer formation, and outlining how molecular genetics techniques are facilitating rapid advances in this field.
Examinations: Midterm and final

MOBG403 Prenatal Genetic Diagnosis and Genetic Counselling
Course Description:
This course will consider genetic indications for prenatal diagnosis, estimation and calculation of recurrence risks, techniques and their indications: conventional cytogenetics; molecular cytogenetics; mutation analysis; biochemical diagnosis; questionable results; mosaicism and chimaerism. It will also provide a foundation in the growing field of genetic counselling, helping students to determine when to suspect hereditary/genetic conditions, recognise the more common inherited conditions in different clinical settings and develop effective communication skills.
Examinations: Midterm and final

MOBG404 Immunogenetics
Course Description:
This module will provide an overview of the cellular and molecular basis of the immune response in human health and disease. The structure, function and complex mechanisms of host defence by B- and T-cells will be explored, covering the role of inflammatory mediators, soluble effectors and cellular cytotoxicity in inflammation and immunity.
Books: Immunology, Thao Doan, Roger Melvold, Susan Viselli, Carl Valtenbaug, 2012
Examinations: Midterm and final

MOBG405 Academic English and Writing I
Course Description:
This course will provide information that is essential in writing scientific reports and articles.
Books: Writing Scientific Research Articles: Strategy and Steps, Margaret Cargill , Patrick O'Connor
Examination: Midterm and final

MOBG407 Bioethics
Course Description:
This course will examine some of the ethical issues that have arisen recently in the biological sciences, concentrating on the areas of genetic engineering in microbes, plants and animals, environmental conservation priorities, human personhood and its origins, cloning and stem-cell technologies, genetic testing, and gene therapy.
Examinations: Midterm and final

MOBG408 Genetic and Tissue Engineering
Course Description:
This course will provide the principles underlying strategies for employing selected cells, biomaterial scaffolds, soluble regulators or their genes, and mechanical loading and culture conditions, for the regeneration of tissues and organs in vitro and in vivo are addressed. Differentiated cell types and stem cells will be compared and will be contrasted for this application, as are natural and synthetic scaffolds. The rationale for employing selected growth factors is covered and the techniques for incorporating their genes into the scaffolds will be examined. Discussion also addresses the influence of environmental factors including mechanical loading and culture conditions (e.g., static versus dynamic). Methods for fabricating tissue-engineered products and devices for implantation will be taught. Examples of tissue engineering-based procedures currently employed clinically will be analyzed as case studies.
Examinations: Midterm and final

MOBG409 Academic English and Writing II
Course Description: This course will provide information that is essential in writing scientific reports and articles.
Examination: Midterm and final

MOBG501 Enzymology
Course Description:
This course will explain the molecular basis of the often complex catalytic mechanisms of enzymes in biological systems, focusing particularly on their relevance to and applications in medicine. The underlying principles of enzyme catalysis and techniques for the study of enzyme mechanism and structure will be covered.
Examinations: Midterm and final

MOBG502 Virology
Course Description:
This course will explain the major virus families, virus structure, steps in viral replication, interaction with cellular signalling pathways, diseases and pathogenesis.
Examinations: Midterm and final

MOBG503 Ageing
Course Description:
This course will survey the biology of ageing, covering evolutionary and mechanistic theories of ageing, the new model organism genetics of lifespan, methods in ageing research, cellular senescence, telomeres and cancer, prospects for treatments for ageing.
Examinations: Midterm and final

MOBG504 Nutrigenetics, Nutrigenomics and Persolised Nutrition
Course Description:
This course will focus on understanding of biochemistry, nutrition physiology, and basic knowledge of genetics /molecular biology. The objectives of the module will include knowledge of nutrient relevant pathways of metabolism and cellular signalling cascades, regulation of metabolism pathways in different levels (molecular, cellular, level of organ, organism) of biological integrity, basics of genetic variations, constitutive databases and their appliances.
Examinations: Midterm and final

MOBG505 Behavioural Genetics
Course Description:
This course will provide a fundamental underpinning for human behavioural genetics, looking at putative genetic factors in human behavioural dimensions.
Examinations: Midterm and final

MOBG506 Forensic Genetics
Course Description:
This course will explore history of forensic DNA analysis, mini-satellite DNA and short tandem repeats (STRs), DNA sequences as unique human identifiers, DNA extraction and PCR; STR analysis, ethics of DNA and DNA databases, overview of the molecular genetics and use of polymorphisms (mitochondrial DNA, single nucleotide polymorphisms (SNPs) and Y-STR profiling) in human identification.
Books: Forensic DNA Typing: Biology, Technology, and Genetics of STR Markers, John M. Butler, 2005
Examinations: Midterm and final

MOBG507 IT and Numeracy Skills in Advanced Molecular Biology
Course Description:
This course will provide the use of programs, such as MatLab, that are essential in molecular biology.
Books: 1) Animal Cell Culture and Technology: The Basics, Michael Butler, 2003. 2) Mammalian Cell Cultures for Biologics Manufacturing (Advances in Biochemical Engineering/Biotechnology), Weichang Zhou, Anne Kantardjieff, 2014.
Examinations: Midterm and final

MOBG508 Nanotechnology and modelling in biological systems
Course Description:
This course will explore the basics of the quantum mechanics and molecular mechanics methods, with emphasis on modelling the structures and reactions of small molecules of biological importance using quantum methods and studying the structures and dynamics of biological macromolecules using molecular dynamics simulations.
Books: 1) Modeling Biological Systems: Principles and Applications, James W. Haefner, 2005. 2) Nucleic Acid Nanotechnology (Nucleic Acids and Molecular Biology), Jorgen Kjems, Elena Ferapontova, 2013
Examinations: Midterm and final

MOBG509 Gene Therapy
Course Description:
This course will provide an overview of gene therapy, emphasising the clinical history, the types of diseases that could benefit the most, and ethical issues. Some of the major gene transfer vector systems will be covered in detail, highlighting advances in this rapidly developing field.
Examinations: Midterm and final

MOBG510 Stem Cell Biology
Course Description:
This course will provide an in-depth account of stem cell biology, covering molecular and genetic control of cell fate specification and differentiation, stem cell niches, adult, embryonic and cancer stem cells and induced pluripotent cells, using stem cells for therapy, ethical use of stem cell therapy and recent research issues.
Examinations: Midterm and final

MOBG511 Pharmacogenetics and Personalised Medicine
Course Description:
This course will provide an overview of the molecular basis of pharmacogenetics, helping students to understand the implications of genetic variability on pharmacokinetics and pharmacodynamics, as well as other aspects such as adverse drug reactions. It will focus on the genetic determinants of drug response at the single gene level, and its impact on pharmaceuticals, therapeutics, and clinical practice.
Examinations: Midterm and final